MATERIALS AND METHODS

Patients and samples

To evaluate the clinicopathological significance and heterogeneity of miR-21 status, 170 patients with advanced CRC presenting synchronous or metachronous metastases who had undergone surgical resection at Seoul National University Bundang Hospital between May 2003 and December 2009 were enrolled. The clinicopathological characteristics were obtained from the patients’ medical records and pathology reports. Follow-up information, including patient’s outcome and the interval between the date of surgical resection and death was collected. Data from patients lost to follow-up or those who had died from causes other than CRC were censored.

Ethical statement

All samples were obtained from surgically resected tumors examined pathologically at the Department of Pathology, Seoul National University Bundang Hospital. All samples and medical record data were anonymized before use in this study and the participants did not provide written informed consent. The use of medical record data and tissue samples for this study was approved by the Institutional Review Board of Seoul National University Bundang Hospital (reference No. B-1109/136-302).

Tissue array method

Surgically resected primary CRC specimens were formalin-fixed and paraffin-embedded (FFPE). For each case, representative areas of the donor blocks were obtained and rearranged into new recipient blocks (Superbiochips Laboratories, Seoul, Korea). A single core was 2 mm in diameter and those containing >20% tumor cells were considered valid cores.

miRNA in situ hybridization

Tissue microarray slides were processed by using locked nucleic acid (LNA)–fluorescence in situ hybridization (FISH) oligonucleotide probes for miR-21 and U6, both labeled with fluorescein at the 5'-end, according to the protocol described in the preparation protocol. After deparaffinization, the slides were incubated with proteinase-K and endogenous peroxidase was blocked with 3% H₂O₂. Next, the slides were incubated with hybridization mix containing 1 nM LNA U6 snRNA probe (Exiqon, Vedbaek, Denmark) and 20 nM doubled-DIG LNA miR-21 probe (Exiqon) in ThermoBrite (Abbott Laboratories, Abbott Park, IL, USA) for 1 hour at 50°C. Next, the slides were incubated in blocking solution and antifluorescein–horseradish peroxidase antibody (1:125, PerkinElmer, Shelton, CT, USA) for 1 hour. The signals were then amplified using Tyramide Signal Amplification (TSA-plus FITC, 1:50, PerkinElmer) for 10 minutes at room temperature. After incubation, the slides were mounted directly with SlowFade Gold antifade reagent with DAPI (Invitrogen, Carlsbad, CA, USA). All steps beginning with hybridization were performed in the dark.

The experimental data were interpreted according to the instructions in the RNAscope FFPE Assay Kit (Advanced Cell Diagnostics, Hayward, CA, USA): no staining observed at 40× magnification (score of 0); difficult to see at 40× magnification (score of 1); difficult to see at 20× magnification, but detectable staining at 40× magnification (score of 2); difficult to see at 10× magnification, but detectable staining at 20× magnification (score of 3); and detectable staining at 10× magnification (score of 4). A score of 1–4 indicates miR-21 overexpression (Fig. 1).

Immunohistochemistry

Array slides were labeled by immunohistochemistry using antibodies for smooth muscle actin (SMA; 1:1,000, Neomarkers, Fremont, CA, USA) and desmin (1:300, Dako, Glostrup, Denmark) after a microwave antigen retrieval procedure, except for SMA. The staining procedures were carried out using the ultraView Universal DAB Kit (Ventana Medical Systems, Tucson, AZ, USA) and an automated stainer (BenchMark XT, Ventana Medical Systems), according to the manufacturer’s instructions.

Calculation of CAFs using digital pathology

CRC cells were considered as internal negative controls. Intestinal muscular layer or medium- to large-sized vessels were considered as internal positive controls for desmin and SMA. Samples showing inappropriate staining in internal negative or positive controls were considered non-informative and were excluded from the analysis. Slides were scanned using an Aperio ScanScopeH CS instrument (Aperio Technologies Inc., Vista, CA, USA) at 20 × magnification. Because desmin-positive muscularis mucosa and propria are positive for SMA staining, the area of CAFs (mm²) was calculated by subtracting the areas of desmin staining from that of SMA staining (SMA-desmin).

Microsatellite instability

Microsatellite instability (MSI) was assessed in 160 CRC cases with available tissue. MSI results were generated by comparing the allelic profiles of five microsatellite markers (BAT-26, BAT-25, D5S346, D17S250, and D2S123) in the tumors and corresponding normal samples. Polymerase chain reaction products from the FFPE tissues were analyzed using an automated DNA sequencer (ABI 3731 Genetic Analyzer, Applied Biosystems, Foster City, CA, USA) according to the protocol.

Statistical analyses

The association between the clinicopathological features and miR-21 status was analyzed by using the chi-square or Fisher exact test, as appropriate. The correlation between miR-21 expression and CAFs was examined by using the Mann-Whitney test. The patients’ survival was analyzed by using the Kaplan-Meier method and the log-rank test was used to determine if there were any significant differences between the survival curves. A p-value <.05 was considered statistically significant. All statistical analyses were performed using the SPSS statistics ver. 21 software (IBM Corp., Armonk, NY, USA).

RESULTS

miR-21 stromal expression and regional heterogeneity in advance CRC patients

The miR-21 signal was predominantly observed in the stromal compartment of the cancer and the normal mucosa was negative for miR-21 (Fig. 1). The snRNA U6 signal was observed in the nucleus of all cell types. To evaluate the regional heterogeneity of miR-21 expression, we examined tissues from three sites, including the center and periphery of primary cancer as well as distant metastases for each patient with advanced CRC. In the center of primary tumors, a miR-21 FISH score of 0 was observed in 37 (21.8%), a score of 1 in 16 (9.4%), a score of 2 in 56 (32.9%), a score of 3 in 46 (27.1%), and a score of 4 in 15 (8.8%) patients with CRC. In the periphery of primary tumors, a miR-21 FISH score of 0 was observed in 65 (38.2%), a score of 1 in 14 (8.2%), a score of 2 in 46 (27.1%), a score of 3 in 44 (25.9%), and a score of 4 in one (0.6%) patient with CRC. Additionally, in distant metastatic tumors, a miR-21 FISH score of 0 was observed in 79 (46.5%), a score of 1 in 13 (7.6%), a score of 2 in 43 (25.3%), a score of 3 in 32 (18.8%), and a score of 4 in three (1.8%) patients with CRC. miR-21 stromal expression (a score of 1–4) in the center and periphery of primary tumor as well as in distant metastasis was observed in 133 (78.2%), 105 (61.8%), and 91 (53.5%) patients with CRC, respectively.

The heterogeneity of miR-21 status according to tumor location is shown in Table 1. Of the 170 cases, discordance between miR-21 expression in the center and periphery was noted in 54 cases (31.7%). Discordance between the center and distant metastasis was detected in 76 cases (44.7%). Thus, regional heterogeneity of miR-21 stromal expression was very common in patients with advanced CRC.

Clinical implications of miR-21 stromal expression in advanced CRC patients

Table 2 shows the relationships between miR-21 status and the clinicopathological parameters of patients with advanced CRC. In the periphery of primary tumor, miR-21 expression was correlated with less aggressive features, including histologic low grade differentiation (p=.002). In addition, lymphatic invasion and lymph node metastasis was frequently observed in patients with CRC negative for miR-21 (p=.042 and p=.017, respectively). There was no statistically significant correlation between the clinicopathological factors and miR-21 expression in the center of the primary tumors and distant metastatic tumors (p>.05). The expression of miR-21 in distant metastasis was different according to metastatic site (Table 3). miR-21 stromal expression was more frequently observed in lung metastasis and peritoneal seeding (p = .046).

Prognostic significance of miR-21 stromal expression in advanced CRC patients

All 170 patients with advanced CRC were successfully followed up for inclusion in the survival analysis (Fig. 2). The mean follow-up time was 42 months (range, 1 to 105 months) and 73 patients (42.9%) died from cancer during the follow-up period. Kaplan-Meier analysis showed that miR-21 stromal expression in the periphery of primary tumors was significantly associated with a better prognosis (p=.004). There was no significant correlation between the patients’ prognosis and miR-21 expression in the center of primary tumors and distant metastases (p=.925 and p=.863, respectively).

Correlation between miR-21 stromal expression and CAF value

The regional heterogeneous values for CAF in CRC are shown in our previous study [25]. The area occupied by CAFs was the lowest in distant metastases (median, 0.91; interquartile range [IQR], 0.68 to 1.18) than any other sites (median, 1.12; IQR, 0.88 to 1.41 in the center of primary tumors and median, 1.22; IQR, 0.96 to 1.54 in the periphery of primary tumors). Mann-Whitney test showed that miR-21 expression was significantly associated with CAFs in the center of primary tumors (p=.001) and distant metastases (p=.041). In the periphery of primary tumors, miR-21 overexpression was not correlated with CAFs (p=.102) (Fig. 3).

DISCUSSION

Many predictive and prognostic molecular markers have been suggested for CRC. However, they are not reliably accepted due to a lack of reproducibility and validation. Previous studies proposed that high expression of miR-21 might predict poor survival in patients with CRC [20-24]. However, elevated miR-21 level and poor prognosis correlated only in a subgroup of patients with stage II CRC [21-24]. Interestingly, our results contradict those of previous miR-21 expression studies. In our study, miR-21 expression in the periphery of primary tumors was significantly associated with a better prognosis in patients with advanced stage CRC (p=.004) (Fig. 2). Otherwise, there was no significant correlation between the prognosis and miR-21 expression in the center of primary tumors and in distant metastases (p=.925 and p=.863, respectively) (Fig. 2). This discrepancy may be explained by the fact that our cohort was largely comprised of patients with stage IV CRC (98 cases, 57.6%). They received various personalized treatments and these might reflect the statistical difference.

Bullock et al. [36] recently demonstrated that stromal miR-21 expression induced a pro-metastatic mechanism of CRC via activation of matrix metalloproteinase-2. These data highlight the importance of miR-21 deregulation in CRC metastasis. Because all patients in our study presented with advanced CRC with metastasis, miR-21 may be expressed at higher levels than that observed in previous reports. In our study, miR-21 expression in the center and periphery of primary tumors and in distant metastasis was observed in 78.2%, 61.8%, and 53.5% of the patients, respectively, whereas it was observed in 27.4% of the patients in another study [22]. Our data suggest that the lack of miR-21 expression in patients presenting with CRC with metastasis is associated with a rather poor prognosis and more frequent lymphatic invasion and lymph node metastasis (Table 2, Fig. 1), presumably because, in these patients, the metastatic mechanism is controlled by other regulatory pathways. Further studies are necessary to prove that other mechanisms induce CRC metastasis, independently of miR-21. The evaluation of the prognostic value of miR-21 expression in patients with advanced CRC presenting distant metastasis might be of little importance.

Previous studies in various cancers indicated that miR-21 localizes mainly in the cancer stroma and more particularly in the stromal fibroblast-like cells [21,22,24]. This localization may be due to molecules secreted by cancer cells, which influence the microenvironment [37-39]. Meanwhile, the mechanisms of regulation of miR-21 in CAFs remain unknown. Only few studies examined the correlation between the value of CAFs and miR-21 expression [40]. Our study revealed that miR-21 expression was associated with CAF value in the center of primary tumors and distant metastases (p = .001 and p = .041, respectively) (Fig. 3). As expected, the value of CAF was greater in stroma of CRC specimens presenting miR-21 expression. Therefore, we should be careful when evaluating stromal miR-21 expression. In most previous studies, miR-21 expression was evaluated quantitatively by image analysis [21,24,36]. This method may mislead us when distinguishing miR-21 high expression from a simple increase in the number of CAFs. Thus, accurate observation should be performed to distinguish miR-21 expression from CAF increase.

To clarify miR-21 expression in CRC, being aware of the heterogeneity in miR-21 expression level is crucial because regional heterogeneity can lead to sampling bias. In recent studies, intra-tumor heterogeneity of various miRNAs was detected in colorectal, pancreatic, and breast cancer [34,35,41]. Our study indicates miR-21 regional heterogeneity, which constitutes approximately 40% of the total cohort (Table 1). Thus, a reliable assessment of CRC miR-21 expression may include sampling of the primary tumor in several locations and metastasis.

In conclusion, we demonstrated that miR-21 is expressed in advanced CRC and that this upregulation is mainly confined to the cancer stroma. Our FISH data indicated that miR-21 expression is related to CAF value in the center of primary tumors and distant metastasis. We determined that miR-21 expression frequently presents regional heterogeneity in CRC. Such data could lead to the new perspective of miR-21 level measurement. The evaluation of miR-21 expression for the prediction of survival in patient with advanced CRC is a matter of debate.

Acknowledgments

Fig. 1.

MicroRNA-21 (miR-21) staining using locked nucleic acid–based in situ hybridization in colorectal cancer. (A) miR-21 expression is observed in cancer stromal tissue. (B) No miR-21 expression is observed in normal colonic mucosa.

Fig. 2.

Kaplan-Meier curves illustrating the overall survival of patients with advanced colorectal cancer in relation to microRNA-21 expression. (A) Center. (B) Periphery. (C) Distant metastasis.

Fig. 3.

Correlation between microRNA-21 (miR-21) expression and cancer associated fibroblasts (CAFs) by Mann-Whitney analysis. (A) Center. (B) Periphery. (C) Distant metastasis. CI, confidence interval.

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Figure & Data

References

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