1Division of Molecular Diagnostics of Oncogenic Infections, Research Program Infection and Cancer, German Cancer Research Center (DKFZ), Heidelberg, Germany
2Department of Biology, College of Science, University of Santo Tomas, Manila, Philippines
3Research Center for the Natural and Applied Sciences, University of Santo Tomas, Manila, Philippines
4Department of ENT Head and Neck Surgery, Mariano Marcos Memorial Hospital and Medical Center, Ilocos Norte, Philippines
5Department of Pathology and Laboratories, Mariano Marcos Memorial Hospital and Medical Center, Ilocos Norte, Philippines
© 2019 The Korean Society of Pathologists/The Korean Society for Cytopathology
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
Author Contributions
Conceptualization: PMA, JO, JDR, DH, MP
Data curation: PMA, CS, SR.
Funding acquisition: PMA, MP.
Investigation: PMA, CS, JO, SR, ML.
Methodology: PMA, AM, DH, MP
Project administration: PMA, JO, ML, JDR, DH, MP.
Resources: PMA, CS, JO, SR, ML, MP.
Supervision: JO, ML, JDR, DH, MP.
Validation: DH, MP.
Visualization: PMA, JDR, DH, MP.
Writing—original draft: PMA, DH, MP.
Writing—review & editing: PMA, DH, MP.
Conflicts of Interest
MP has received royalties for patents owned by DKFZ and research support through cooperate contracts between DKFZ and Roche and Qiagen in the field of HPV diagnostics. However, the funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
Funding
PMA was supported through grants from the Department of Science and Technology (DOST) and the Commission on Higher Education of the Philippines (CHEd).
Characteristic | Case (n = 22) | Control (n = 20) | p-valuea |
---|---|---|---|
Age (yr) | 63 (41–87) | 62 (39–74) | |
Sex | |||
Male | 13 (59) | 11 (55) | |
Female | 9 (41) | 9 (45) | |
Tumor site | |||
Larynx | 7 (32) | - | |
Oral cavity | 13 (59) | - | |
Oropharynx | 2 (9) | - | |
Tumor grade | |||
Well-differentiated | 18 (82) | - | |
Moderately-differentiated | 3 (14) | - | |
Poorly-differentiated | 1 (4) | - | |
Tumor category | |||
Tis, T1, T2 | 5 (23) | - | |
T3, T4 | 17 (77) | - | |
Alcohol consumption | .516 | ||
Never | 11 (50) | 8 (40) | |
Ever | 11 (50) | 12 (60) | |
Tobacco use | .052 | ||
Never | 3 (14) | 8 (40) | |
Ever | 19 (86) | 12 (60) | |
Median age at first sexual intercourse (yr) | 20.5 (19–24) | 21 (17.5–25) | .870 |
No. of lifetime sex partners | > .99 | ||
0–5 | 19 (86) | 17 (85) | |
≥ 6 | 3 (14) | 3 (15) | |
Performs oral-genital sex | .332 | ||
Yes | 3 (14) | 5 (25) | |
No | 19 (86) | 14 (70) | |
No answer | 0 | 1 (5) | |
Engages in casual and/or commercial sex | .018 | ||
Yes | 0 | 5 (25) | |
No | 22 (100) | 15 (75) | |
Engages in same-sex sexual activity | .099 | ||
Yes | 0 | 3 (15) | |
No | 22 (100) | 17 (85) | |
Sex partner has history of STD | .003 | ||
Yes | 0 | 1 (5) | |
No | 22 (100) | 13 (65) | |
Uncertain/no answer | 0 | 6 (30) | |
Personal history of STD | .221 | ||
Yes | 0 | 2 (10) | |
No | 22 (100) | 18 (90) | |
Use of condom | .029 | ||
Yes | 6 (27) | 13 (65) | |
No | 16 (73) | 7 (35) |
Values are presented as median (range) or number (%).
aChi-square test of homogeneity was used to compare nominal data while Fisher’s exact test was used to compare expected frequencies less than 5.00 (i.e., number of lifetime sex partners, performs oral-genital sex, engages in casual and/or commercial sex, engages in same-sex sexual activity, sex partner with history of sexually-transmitted disease [STD], and personal history of STD). Mann-Whitney rank-sum test was used to compare median scores.
Case ID | Sex | Age at initial diagnosis (yr) | Tumor site | HPV DNAa | HPV mRNAa |
Seropositivity |
|
---|---|---|---|---|---|---|---|
Early proteins (E6, E7, E1, E2) | Late proteins (L1) | ||||||
18-1 | M | 49 | LSCC | HPV11 L1b | HPV11 E6 flb | Negative | HPV11b |
09-1 | F | 59 | OSCC | Negative | Negative | HPV18 E6, HPV45 E6b | HPV16, 31, 33, 52, 58b |
11-1 | F | 65 | OSCC | Negative | Negative | HPV31 E6b | HPV31b |
22-1 | M | 78 | OSCC | Negative | Negative | HPV18 E1, HPV16 E2b | HPV11, 18, 31, 33, 45, 52, 58b |
07-1 | F | 53 | OSCC | Negative | Negative | HPV33 E7b | Negative |
14-1 | M | 59 | LSCC | Negative | Negative | HPV33 E7b | Negative |
17-1 | M | 41 | LSCC | Negative | Negative | HPV16 E7b | Negative |
21-1 | F | 69 | OSCC | Negative | Negative | HPV18 E7, HPV18 E2b | Negative |
06-1 | F | 70 | OSCC | Negative | Negative | Negative | HPV58b |
15-1 | M | 59 | LSCC | Negative | Negative | Negative | HPV33b |
19-3 | M | 69 | LSCC | Negative | Negative | Negative | HPV6, 11, 16b |
01-1 | M | 87 | OSCC | Negative | Negative | Negative | Negative |
02-1 | F | 76 | OPSCC | Negative | Negative | Negative | Negative |
03-1 | M | 57 | OPSCC | Negative | Negative | Negative | Negative |
04-1 | M | 57 | OSCC | Negative | Negative | Negative | Negative |
05-1 | M | 77 | OSCC | Negative | Negative | Negative | Negative |
08-1 | F | 51 | OSCC | Negative | Negative | Negative | Negative |
10-1 | F | 69 | OSCC | Negative | Negative | Negative | Negative |
12-1 | F | 70 | OSCC | Negative | Negative | Negative | Negative |
13-1 | M | 55 | OSCC | Negative | Negative | Negative | Negative |
16-1 | M | 61 | LSCC | Negative | Negative | Negative | Negative |
20-1 | M | 68 | LSCC | Negative | Negative | Negative | Negative |
HPV, human papillomavirus; LSCC, laryngeal squamous cell carcinoma; OSCC, oral cavity squamous cell carcinoma; OPSCC, oropharyngeal squamous cell carcinoma.
aMolecular analyses done earlier [15];
bPositive for HPV DNA, HPV mRNA, or HPV antibodies.
Control ID | Sex | Age (yr) |
Seropositivity |
|
---|---|---|---|---|
Early proteins (E6, E7, E1, E2) | Late proteins (L1) | |||
06-0 | F | 71 | HPV16 E1, HPV18 E1, HPV16 E2, HPV18 E2a | HPV11, 18, 31, 33, 45 52, 58a |
07-0 | F | 53 | HPV16 E7a | HPV11, 16, 18, 31, 45a |
03-0 | M | 59 | HPV33 E7, HPV16 E1a | Negative |
12-0 | F | 72 | HPV16 E2a | Negative |
20-0 | M | 65 | HPV11 E6, HPV52 E6a | Negative |
08-0 | F | 54 | Negative | HPV6, 11, 58a |
14-0 | M | 59 | Negative | HPV11, 16, 31, 33, 45, 52, 58a |
15-0 | M | 61 | Negative | HPV11a |
17-0 | M | 39 | Negative | HPV11, 31a |
18-0 | M | 47 | Negative | HPV 18, 58a |
02-0 | F | 74 | Negative | Negative |
04-0 | M | 55 | Negative | Negative |
05-0 | M | 74 | Negative | Negative |
09-0 | F | 58 | Negative | Negative |
10-0 | F | 68 | Negative | Negative |
11-0 | F | 63 | Negative | Negative |
13-0 | M | 53 | Negative | Negative |
16-0 | M | 64 | Negative | Negative |
19-0 | M | 66 | Negative | Negative |
21-0 | F | 66 | Negative | Negative |
Characteristic | Case (n = 22) | Control (n = 20) | p-value |
---|---|---|---|
Age (yr) | 63 (41–87) | 62 (39–74) | |
Sex | |||
Male | 13 (59) | 11 (55) | |
Female | 9 (41) | 9 (45) | |
Tumor site | |||
Larynx | 7 (32) | - | |
Oral cavity | 13 (59) | - | |
Oropharynx | 2 (9) | - | |
Tumor grade | |||
Well-differentiated | 18 (82) | - | |
Moderately-differentiated | 3 (14) | - | |
Poorly-differentiated | 1 (4) | - | |
Tumor category | |||
Tis, T1, T2 | 5 (23) | - | |
T3, T4 | 17 (77) | - | |
Alcohol consumption | .516 | ||
Never | 11 (50) | 8 (40) | |
Ever | 11 (50) | 12 (60) | |
Tobacco use | .052 | ||
Never | 3 (14) | 8 (40) | |
Ever | 19 (86) | 12 (60) | |
Median age at first sexual intercourse (yr) | 20.5 (19–24) | 21 (17.5–25) | .870 |
No. of lifetime sex partners | > .99 | ||
0–5 | 19 (86) | 17 (85) | |
≥ 6 | 3 (14) | 3 (15) | |
Performs oral-genital sex | .332 | ||
Yes | 3 (14) | 5 (25) | |
No | 19 (86) | 14 (70) | |
No answer | 0 | 1 (5) | |
Engages in casual and/or commercial sex | .018 | ||
Yes | 0 | 5 (25) | |
No | 22 (100) | 15 (75) | |
Engages in same-sex sexual activity | .099 | ||
Yes | 0 | 3 (15) | |
No | 22 (100) | 17 (85) | |
Sex partner has history of STD | .003 | ||
Yes | 0 | 1 (5) | |
No | 22 (100) | 13 (65) | |
Uncertain/no answer | 0 | 6 (30) | |
Personal history of STD | .221 | ||
Yes | 0 | 2 (10) | |
No | 22 (100) | 18 (90) | |
Use of condom | .029 | ||
Yes | 6 (27) | 13 (65) | |
No | 16 (73) | 7 (35) |
Case ID | Sex | Age at initial diagnosis (yr) | Tumor site | HPV DNA |
HPV mRNA |
Seropositivity |
|
---|---|---|---|---|---|---|---|
Early proteins (E6, E7, E1, E2) | Late proteins (L1) | ||||||
18-1 | M | 49 | LSCC | HPV11 L1 |
HPV11 E6 fl |
Negative | HPV11 |
09-1 | F | 59 | OSCC | Negative | Negative | HPV18 E6, HPV45 E6 |
HPV16, 31, 33, 52, 58 |
11-1 | F | 65 | OSCC | Negative | Negative | HPV31 E6 |
HPV31 |
22-1 | M | 78 | OSCC | Negative | Negative | HPV18 E1, HPV16 E2 |
HPV11, 18, 31, 33, 45, 52, 58 |
07-1 | F | 53 | OSCC | Negative | Negative | HPV33 E7 |
Negative |
14-1 | M | 59 | LSCC | Negative | Negative | HPV33 E7 |
Negative |
17-1 | M | 41 | LSCC | Negative | Negative | HPV16 E7 |
Negative |
21-1 | F | 69 | OSCC | Negative | Negative | HPV18 E7, HPV18 E2 |
Negative |
06-1 | F | 70 | OSCC | Negative | Negative | Negative | HPV58 |
15-1 | M | 59 | LSCC | Negative | Negative | Negative | HPV33 |
19-3 | M | 69 | LSCC | Negative | Negative | Negative | HPV6, 11, 16 |
01-1 | M | 87 | OSCC | Negative | Negative | Negative | Negative |
02-1 | F | 76 | OPSCC | Negative | Negative | Negative | Negative |
03-1 | M | 57 | OPSCC | Negative | Negative | Negative | Negative |
04-1 | M | 57 | OSCC | Negative | Negative | Negative | Negative |
05-1 | M | 77 | OSCC | Negative | Negative | Negative | Negative |
08-1 | F | 51 | OSCC | Negative | Negative | Negative | Negative |
10-1 | F | 69 | OSCC | Negative | Negative | Negative | Negative |
12-1 | F | 70 | OSCC | Negative | Negative | Negative | Negative |
13-1 | M | 55 | OSCC | Negative | Negative | Negative | Negative |
16-1 | M | 61 | LSCC | Negative | Negative | Negative | Negative |
20-1 | M | 68 | LSCC | Negative | Negative | Negative | Negative |
Control ID | Sex | Age (yr) | Seropositivity |
|
---|---|---|---|---|
Early proteins (E6, E7, E1, E2) | Late proteins (L1) | |||
06-0 | F | 71 | HPV16 E1, HPV18 E1, HPV16 E2, HPV18 E2 |
HPV11, 18, 31, 33, 45 52, 58 |
07-0 | F | 53 | HPV16 E7 |
HPV11, 16, 18, 31, 45 |
03-0 | M | 59 | HPV33 E7, HPV16 E1 |
Negative |
12-0 | F | 72 | HPV16 E2 |
Negative |
20-0 | M | 65 | HPV11 E6, HPV52 E6 |
Negative |
08-0 | F | 54 | Negative | HPV6, 11, 58 |
14-0 | M | 59 | Negative | HPV11, 16, 31, 33, 45, 52, 58 |
15-0 | M | 61 | Negative | HPV11 |
17-0 | M | 39 | Negative | HPV11, 31 |
18-0 | M | 47 | Negative | HPV 18, 58 |
02-0 | F | 74 | Negative | Negative |
04-0 | M | 55 | Negative | Negative |
05-0 | M | 74 | Negative | Negative |
09-0 | F | 58 | Negative | Negative |
10-0 | F | 68 | Negative | Negative |
11-0 | F | 63 | Negative | Negative |
13-0 | M | 53 | Negative | Negative |
16-0 | M | 64 | Negative | Negative |
19-0 | M | 66 | Negative | Negative |
21-0 | F | 66 | Negative | Negative |
Values are presented as median (range) or number (%). Chi-square test of homogeneity was used to compare nominal data while Fisher’s exact test was used to compare expected frequencies less than 5.00 (i.e., number of lifetime sex partners, performs oral-genital sex, engages in casual and/or commercial sex, engages in same-sex sexual activity, sex partner with history of sexually-transmitted disease [STD], and personal history of STD). Mann-Whitney rank-sum test was used to compare median scores.
HPV, human papillomavirus; LSCC, laryngeal squamous cell carcinoma; OSCC, oral cavity squamous cell carcinoma; OPSCC, oropharyngeal squamous cell carcinoma. Molecular analyses done earlier [ Positive for HPV DNA, HPV mRNA, or HPV antibodies.
Positive for human papillomavirus (HPV) antibodies.