1Department of Pathology, Keimyung University School of Medicine, Daegu, Korea
2Division of Gastroenterology and Hepatology, Department of Internal Medicine, Keimyung University School of Medicine, Daegu, Korea
3Division of Colorectal Surgery, Department of Surgery, Keimyung University School of Medicine, Daegu, Korea
© 2023 The Korean Society of Pathologists/The Korean Society for Cytopathology
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
Ethics Statement
Not applicable.
Availability of Data and Material
All data generated or analyzed during the study are included in this published article (and its supplementary information files).
Code Availability
Data sharing not applicable to this article as no datasets were generated or analyzed during the study.
Author Contributions
Conceptualization: SUB. Figures and data: JMP. Writing—original draft: JMP, JK, YJL. Writing—review & editing: HWL. Approval of final manuscript: all authors.
Conflicts of Interest
The authors declare that they have no potential conflicts of interest.
Funding Statement
No funding to declare.
Related genes | Disease entity | Mechanism | Reference |
---|---|---|---|
NOD2 | CD and UC | Apoptosis and activates NF-κB, induce interleukin 1-beta | [19–23] |
TLR4 | CD | Initiating innate immune responses | [19] |
IL23R | CD and UC | Activation of Th17 lymphocytes | [27,28] |
IL12B | CD | Activation of Th17 lymphocytes | [25] |
JAK2 | CD | Activation of Th17 lymphocytes | [29] |
CX3CR1 | CD | Leukocyte chemotaxis and adhesion | [30] |
STAT3 | CD and UC | Innate immune mechanisms | [25,26] |
ATG16L1 | CD | Autophagocytosis | [31] |
IRGM | CD | Autophagocytosis | [25] |
FUT2 | CD | Affects the composition of the gut microbiota | [32] |
TGF-β | CD | Initiation of inflammation | [33,34] |
MMP3 | CD and UC | Mediate degradation of components of the extracellular matrix | [35] |
MAGI1 | CD | Disruption of epithelial barrier via abrnormality of tight junction of intestinal epithelial cells | [36] |
IBD, inflammatory bowel disease; NOD2, nucleotide-binding oligomerization domain-containing protein 2; CD, Crohn disease; UC, ulcerative colitis; NF-κB, nuclear factor κB; TLR4, Toll-like receptors 4; IL23R, interleukin-23 receptor; IL12B, interleukin-12 subunit beta; JAK2, Janus kinases 2; CX3CR1, C-X3-C motif chemokine receptor 1; STAT3, signal transducers and activators of the transcription 3; ATG16L1, autophagy-related 16-like 1; IRGM, immunity-related GTPase family M protein; FUT2, fucosyltransferase 2; TGF-β, transforming growth factor beta; MMP-3, matrix metalloproteinase-3; MAGI1, membrane-associated guanylate kinase inverted 1.
Related genes | Disease entity | Mechanism | Reference |
---|---|---|---|
NOD2 | CD and UC | Apoptosis and activates NF-κB, induce interleukin 1-beta | [ |
TLR4 | CD | Initiating innate immune responses | [ |
IL23R | CD and UC | Activation of Th17 lymphocytes | [ |
IL12B | CD | Activation of Th17 lymphocytes | [ |
JAK2 | CD | Activation of Th17 lymphocytes | [ |
CX3CR1 | CD | Leukocyte chemotaxis and adhesion | [ |
STAT3 | CD and UC | Innate immune mechanisms | [ |
ATG16L1 | CD | Autophagocytosis | [ |
IRGM | CD | Autophagocytosis | [ |
FUT2 | CD | Affects the composition of the gut microbiota | [ |
TGF-β | CD | Initiation of inflammation | [ |
MMP3 | CD and UC | Mediate degradation of components of the extracellular matrix | [ |
MAGI1 | CD | Disruption of epithelial barrier via abrnormality of tight junction of intestinal epithelial cells | [ |
IBD, inflammatory bowel disease;